Audrey Lin, PhD

Marsh, WA, Scarsbrook, L, Yüncü, E, Hodgson, L, Lin, AT, De Iorio, M, Thalmann, O, Thomas, MG, Goor, M, Bergström, A, Noseda, A, Amiri, S, Biglari, F, Borić, D, Bougiouri, K, Carmagnini, A, Giannì, M, Higham, T, Lebrasseur, O, Linderholm, A, Mannino, MA, Middleton, C, Mustafaoğlu, G, Perri, A, Peters, J, Richards, M, Sarıtaş, Ö, Skoglund, P, Stevens, RE, Stringer, C, Tabbada, K, Talbot, HM, Van der Sluis, LG, Bello, SM, Dimitrijevic, V, Martin, L, Mashkour, M, Parfitt, SA, Vukovic, S, Brace, S, Craig, OE, Baird, D, Charlton, S, Larson, G, Barnes, I & Frantz, LAF 2026, 'Dogs were widely distributed across western Eurasia during the Palaeolithic', Nature, vol. 651, no. 8107, pp. 995-1003. https://doi.org/10.1038/s41586-026-10170-x

Manin, A, Debruyne, R, Lin, A, Lebrasseur, O, Dimopoulos, EA, González Venanzi, L, Charlton, S, Scarsbrook, L, Hogan, A, Linderholm, A, Boyko, AR, Joncour, P, Berón, M, González, P, Castro, JC, Cornero, S, Cantarutti, G, López Mendoza, P, Martínez, I, Mendoza España, V, Pavlovic, D, Prates, L, Prevosti, F, Rogan, J, Oyaneder, A, Power, X, Defrance, S, Wylde, M, Gutierrez, B, Grouard, S, Freiwald, C, Awe, JJ, Ebert, CE, Hoggarth, JA, Equihua, JC, Pereira, G, Parker, H, Lefèvre, C, Goepfert, N, Ostrander, E, Larson, G, Frantz, L, Hitte, C & Ollivier, M 2025, 'Ancient dog mitogenomes support the dual dispersal of dogs and agriculture into South America', Proceedings of the Royal Society of London B: Biological Sciences, vol. 292, no. 2049, 20242443. https://doi.org/10.1098/rspb.2024.2443

Kistler, L, Freitas, FDO, Gutaker, RM, Maezumi, SY, Ramos-Madrigal, J, Simon, MF, Mendoza F, JM, Drovetski, SV, Loiselle, H, de Oliveira, EJ, Vieira, EA, Carvalho, LJCB, Perez, ME, Lin, AT, Liu, HL, Miller, R, Przelomska, NAS, Ratan, A, Wales, N, Wann, K, Zhang, S, García, M, Valenzuela, D, Rothhammer, F, Santoro, CM, Domic, AI, Capriles, JM & Allaby, RG 2025, 'Historic manioc genomes illuminate maintenance of diversity under long-lived clonal cultivation', Science, vol. 387, no. 6738, eadq0018. https://doi.org/10.1126/science.adq0018

Lin, AT, Fairbanks, RA, Barba-Montoya, J, Kistler, L & Liu, H-L 2025, 'A legacy of genetic entanglement with wolves shapes modern dogs', Proceedings of the National Academy of Sciences of the United States of America, vol. 122, no. 48, e2421768122. https://doi.org/10.1073/pnas.2421768122

Przelomska, NAS, Balazik, MT, Lin, AT, Reeder-Myers, LA, Rick, TC & Kistler, L 2024, 'Archaeogenomic analysis of Chesapeake Atlantic sturgeon illustrates shaping of its populations in recovery from severe overexploitation', Proceedings of the Royal Society of London B: Biological Sciences, vol. 291, no. 2032, 20241145. https://doi.org/10.1098/rspb.2024.1145

Sandoval-Castellanos, E, Hare, AJ, Lin, AT, Dimopoulos, EA, Daly, KG, Geiger, S, Mullin, VE, Wiechmann, I, Mattiangeli, V, Lühken, G, Zinovieva, NA, Zidarov, P, Çakırlar, C, Stoddart, S, Orton, D, Bulatović, J, Mashkour, M, Sauer, EW, Horwitz, LK, Horejs, B, Atici, L, Özkaya, V, Mullville, J, Pearson, MP, Mainland, I, Card, N, Brown, L, Sharples, N, Griffiths, D, Allen, D, Arbuckle, B, Abell, JT, Duru, G, Mentzer, SM, Munro, ND, Uzdurum, M, Gülçur, S, Buitenhuis, H, Gladyr, E, Stiner, MC, Pöllath, N, Özbaşaran, M, Krebs, S, Burger, J, Frantz, L, Medugorac, I, Bradley, DG & Peters, J 2024, 'Ancient mitogenomes from Pre-Pottery Neolithic Central Anatolia and the effects of a Late Neolithic bottleneck in sheep (Ovis aries)', Science Advances, vol. 10, no. 15, eadj0954. https://doi.org/10.1126/sciadv.adj0954

Lin, AT, Hammond-Kaarremaa, L, Liu, HL, Stantis, C, McKechnie, I, Pavel, M, Pavel, SSHLMS, Wyss, SSÁ, Sparrow, DQ, Carr, K, Aninta, SG, Perri, A, Hartt, J, Bergström, A, Carmagnini, A, Charlton, S, Dalén, L, Feuerborn, TR, France, CAM, Gopalakrishnan, S, Grimes, V, Harris, A, Kavich, G, Sacks, BN, Sinding, MHS, Skoglund, P, Stanton, DWG, Ostrander, EA, Larson, G, Armstrong, CG, Frantz, LAF, Hawkins, MTR & Kistler, L 2023, 'The history of Coast Salish “woolly dogs” revealed by ancient genomics and Indigenous Knowledge', Science, vol. 382, no. 6676, pp. 1303-1309. https://doi.org/10.1126/science.adi6549

Jamieson, A, Carmagnini, A, Howard-McCombe, J, Doherty, S, Hirons, A, Dimopoulos, E, Lin, AT, Allen, R, Anderson-Whymark, H, Barnett, R, Batey, C, Beglane, F, Bowden, W, Bratten, J, De Cupere, B, Drew, E, Foley, NM, Fowler, T, Fox, A, Geigl, EM, Gotfredsen, AB, Grange, T, Griffiths, D, Groß, D, Haruda, A, Hjermind, J, Knapp, Z, Lebrasseur, O, Librado, P, Lyons, LA, Mainland, I, McDonnell, C, Muñoz-Fuentes, V, Nowak, C, O'Connor, T, Peters, J, Russo, IRM, Ryan, H, Sheridan, A, Sinding, MHS, Skoglund, P, Swali, P, Symmons, R, Thomas, G, Trolle Jensen, TZ, Kitchener, AC, Senn, H, Lawson, D, Driscoll, C, Murphy, WJ, Beaumont, M, Ottoni, C, Sykes, N, Larson, G & Frantz, L 2023, 'Limited historical admixture between European wildcats and domestic cats', Current Biology, vol. 33, no. 21, pp. 4751-4760.e14. https://doi.org/10.1016/j.cub.2023.08.031

Lin, AT, Hill, S, Calvignac-Spencer, S, Düx, A, Patrono, L, Liu, H-L, Milensky, C, Sholts, S, Kistler, L & Lin, AT 2022, 'Registered report: Evolution of avian influenza virus in historic North American bird populations', Open Science Framework. https://doi.org/10.17605/OSF.IO/F28AV

Perri, AR, Mitchell, KJ, Mouton, A, Álvarez-Carretero, S, Hulme-Beaman, A, Haile, J, Jamieson, A, Meachen, J, Lin, AT, Schubert, BW, Ameen, C, Antipina, EE, Bover, P, Brace, S, Carmagnini, A, Carøe, C, Samaniego Castruita, JA, Chatters, JC, Dobney, K, dos Reis, M, Evin, A, Gaubert, P, Gopalakrishnan, S, Gower, G, Heiniger, H, Helgen, KM, Kapp, J, Kosintsev, PA, Linderholm, A, Ozga, AT, Presslee, S, Salis, AT, Saremi, NF, Shew, C, Skerry, K, Taranenko, DE, Thompson, M, Sablin, MV, Kuzmin, YV, Collins, MJ, Sinding, MHS, Gilbert, MTP, Stone, AC, Shapiro, B, Van Valkenburgh, B, Wayne, RK, Larson, G, Cooper, A & Frantz, LAF 2021, 'Dire wolves were the last of an ancient New World canid lineage', Nature, vol. 591, pp. 87-91. https://doi.org/10.1038/s41586-020-03082-x

Bergström, A, Frantz, L, Schmidt, R, Ersmark, E, Lebrasseur, O, Girdland-Flink, L, Lin, AT, Storå, J, Sjögren, K-G, Anthony, D, Antipina, E, Amiri, S, Bar-Oz, G, Bazaliiskii, VI, Bulatović, J, Brown, D, Carmagnini, A, Davy, T, Fedorov, S, Fiore, I, Fulton, D, Germonpré, M, Haile, J, Irving-Pease, EK, Jamieson, A, Janssens, L, Kirillova, I, Horwitz, LK, Kuzmanovic-Cvetković, J, Kuzmin, Y, Losey, RJ, Dizdar, DL, Mashkour, M, Novak, M, Onar, V, Orton, D, Pasarić, M, Radivojević, M, Rajković, D, Roberts, B, Ryan, H, Sablin, M, Shidlovskiy, F, Stojanović, I, Tagliacozzo, A, Trantalidou, K, Ullén, I, Villaluenga, A, Wapnish, P, Dobney, K, Götherström, A, Linderholm, A, Dalén, L, Pinhasi, R, Larson, G & Skoglund, P 2020, 'Origins and genetic legacy of prehistoric dogs', Science, vol. 370, no. 6516, pp. 557-564. https://doi.org/10.1126/science.aba9572

Lin, AT 2019, 'Specialized sledge dogs accompanied Inuit dispersal across the North American Arctic', Proceedings of the Royal Society B: Biological Sciences, vol. 286, no. 1916, 20191929. https://doi.org/10.1098/rspb.2019.1929

Frantz, LAF, Haile, J, Lin, AT, Scheu, A, Geörg, C, Benecke, N, Alexander, M, Linderholm, A, Mullin, VE, Daly, KG, Battista, VM, Price, M, Gron, KJ, Alexandri, P, Arbogast, R-M, Arbuckle, B, Bӑlӑşescu, A, Barnett, R, Bartosiewicz, L, Baryshnikov, G, Bonsall, C, Borić, D, Boroneanţ, A, Bulatović, J, Çakirlar, C, Carretero, J-M, Chapman, J, Church, M, Crooijmans, R, De Cupere, B, Detry, C, Dimitrijevic, V, Dumitraşcu, V, du Plessis, L, Edwards, CJ, Erek, CM, Erim-Özdoğan, A, Ervynck, A, Fulgione, D, Gligor, M, Götherström, A, Gourichon, L, Groenen, MAM, Helmer, D, Hongo, H, Horwitz, LK, Irving-Pease, EK, Lebrasseur, O, Lesur, J, Malone, C, Manaseryan, N, Marciniak, A, Martlew, H, Mashkour, M, Matthews, R, Matuzeviciute, GM, Maziar, S, Meijaard, E, McGovern, T, Megens, H-J, Miller, R, Mohaseb, AF, Orschiedt, J, Orton, D, Papathanasiou, A, Pearson, MP, Pinhasi, R, Radmanović, D, Ricaut, F-X, Richards, M, Sabin, R, Sarti, L, Schier, W, Sheikhi, S, Stephan, E, Stewart, JR, Stoddart, S, Tagliacozzo, A, Tasić, N, Trantalidou, K, Tresset, A, Valdiosera, C, van den Hurk, Y, Van Poucke, S, Vigne, J-D, Yanevich, A, Zeeb-Lanz, A, Triantafyllidis, A, Gilbert, MTP, Schibler, J, Rowley-Conwy, P, Zeder, M, Peters, J, Cucchi, T, Bradley, DG, Dobney, K, Burger, J, Evin, A, Girdland-Flink, L & Larson, G 2019, 'Ancient pigs reveal a near-complete genomic turnover following their introduction to Europe', Proceedings of the National Academy of Sciences of the United States of America (PNAS), vol. 116, no. 35, pp. 17231-17238. https://doi.org/10.1073/pnas.1901169116

Karamitros, T, Hurst, T, Marchi, E, Karamichali, E, Georgopoulou, U, Mentis, A, Riepsaame, J, Lin, A, Paraskevis, D, Hatzakis, A, McLauchlan, J, Katzourakis, A & Magiorkinis, G 2018, 'Human endogenous retrovirus-K HML-2 integration within RASGRF2 is associated with intravenous drug abuse and modulates transcription in a cell-line model', Proceedings of the National Academy of Sciences, vol. 115, no. 41, pp. 10343-10439. https://doi.org/10.1073/pnas.1811940115